FF6LE Rogue CE / Zone Doctor CE

No XML is being created and the question keep popping each time I load the ROM (I always answer NO as I didn't used 0.6). I didn't expand my project yet. Message names still saves without expanding but an error pops as soon as I load a map with a modified message name (probably since there is no XML file).

In the APPDATA\LOCAL folder, I can find a FF3LE folder with subfolders associated with the file executed (I'm using the 64bit binary so subfolder is called FF6LECEx64.exe_Url_0izqsus0cmztouktqabfirxc3jwq40n3), each subfolders have a user.config file but no XML file per say and FF3LE doesn't seem to read info from user.config since it keep saying "No setting file found, etc etc".